Package: optrefine 1.0.1
optrefine: Optimally Refine Strata
Splits initial strata into refined strata that optimize covariate balance. For more information, please email the author for a copy of the accompanying manuscript. To solve the linear program, the 'Gurobi' commercial optimization software is recommended, but not required. The 'gurobi' R package can be installed following the instructions at <https://www.gurobi.com/documentation/9.1/refman/ins_the_r_package.html>.
Authors:
optrefine_1.0.1.tar.gz
optrefine_1.0.1.zip(r-4.5)optrefine_1.0.1.zip(r-4.4)optrefine_1.0.1.zip(r-4.3)
optrefine_1.0.1.tgz(r-4.4-any)optrefine_1.0.1.tgz(r-4.3-any)
optrefine_1.0.1.tar.gz(r-4.5-noble)optrefine_1.0.1.tar.gz(r-4.4-noble)
optrefine_1.0.1.tgz(r-4.4-emscripten)optrefine_1.0.1.tgz(r-4.3-emscripten)
optrefine.pdf |optrefine.html✨
optrefine/json (API)
NEWS
| # Install 'optrefine' in R: |
| install.packages('optrefine', repos = c('https://kkbrum.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/kkbrum/optrefine/issues
- rhc_X - Right Heart Catheterization Data
Last updated 2 years agofrom:95abfd1870. Checks:OK: 1 ERROR: 1 NOTE: 5. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 09 2024 |
| R-4.5-win | NOTE | Nov 09 2024 |
| R-4.5-linux | ERROR | Nov 09 2024 |
| R-4.4-win | NOTE | Nov 09 2024 |
| R-4.4-mac | NOTE | Nov 09 2024 |
| R-4.3-win | NOTE | Nov 09 2024 |
| R-4.3-mac | NOTE | Nov 09 2024 |
Exports:best_splitcalc_smdsprop_stratrand_pvalsrefinesplit_stratumstrattable_rand_pvals
Dependencies:clicolorspacefansifarverggplot2gluegtableisobandlabelinglatticelifecyclelpSolvemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigR6RColorBrewerRglpkrlangsamplingscalesslamtibbleutf8vctrsviridisLitewithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Find the best split for a stratum | best_split |
| Calculate standardized mean differences for initial and refined strata | calc_smds |
| Constructor for object of class "strat" | new_strat |
| Plot diagnostics for a "strat" object | plot.strat |
| Print stratification object | print.strat |
| Form propensity score strata | prop_strat |
| Generate P-values using empirical randomization null distribution | rand_pvals |
| Refine initial stratification | refine |
| Right Heart Catheterization Data | rhc_X |
| Split one stratum into multiple strata | split_stratum |
| Helper for object of class "strat" | strat |
| Generate a covariate balance table from the empirical randomization null distribution | table_rand_pvals |
| Validator for object of class "strat" | validate_strat |
